Bad interpretation of time in hpc flags
rosetta = {'skl.q':28, 'ccl.q':32, 'standard.q':24, 'compute.q':24, 'bigmem.q':24}
partition = 'skl.q'
maxtime = "01:00:00"
maxcpu = rosetta[partition]
exclusive = True
hpc_flag = 'hpc:{}@{}@{}@{}'.format(partition, maxcpu, maxtime, exclusive)MOSAIC.job:
#!/usr/bin/env sh
. /data/collab/MOSAIC/Work/Laure/run_mosaic/store/mosaic-workspace/KDB/source.me
cd /data/collab/MOSAIC/Work/Laure/run_mosaic/store/mosaic-workspace/7/A/1/9/7A19915235B14D88BA0E22E2F787A601/003-mesh_adaptation
mpirun -np 28 python -c 'from MOSAIC.backbone.services.scheduler.frame import run_capsule;run_capsule("Adapt.capsules.mesh_adaptation.adapt_capsule", "/data/collab/MOSAIC/Work/Laure/run_mosaic/store/mosaic-repository", ["A1BFF6EFCB044DB986D1FC659E8720C2", "mesh adaptation", "adaptation capsule for mosaic", "0.7", "Adapt.capsules.mesh_adaptation.adapt_capsule", {"distInv": [], "mach": []}, {"end": [], "leave": []}, [False, False], ["Draft", "AAB8C00CFCB044E296E096EBEEB1BA15", "FD58FA1B0C5D4B8596E6F6275BEF5C70", "FD58FA1B0C5D4B8596E6F6275BEF5C70"], "C"], "7A19915235B14D88BA0E22E2F787A601", "003", "/data/collab/MOSAIC/Work/Laure/run_mosaic/store/mosaic-workspace/7/A/1/9/7A19915235B14D88BA0E22E2F787A601/003-mesh_adaptation", ["hpc:skl.q@28@3600@True","local"], "distInv", "0.7.0", {"_control":"BUSY","_dashboard":"00000000000000000000000000000000","_owner": ["AAB8C00CFCB044E296E096EBEEB1BA15","B9AE80CE037E435BB45927A36FF650BD","B9AE80CE037E435BB45927A36FF650BD"],"_user":"d600560","_scheduler_mode":"DEFAULT","_workspace":"/data/collab/MOSAIC/ Work/Laure/run_mosaic/store/mosaic-workspace/7/A/1/9/7A19915235B14D88BA0E22E2F787A601","_diff":12,"dryrun":False,"hpc":["skl.q",28,3600,True]} );'
et donc interprété en : "hpc":["skl.q",28,3600,True]
scheduler.log:
Run command : (. /softs/mosaic/1.0/ref/share/MOSAIC/source.me-3.10;sbatch -J MZ_7A19915235B14D88BA0E22E2F787A601_004 -o /data/collab/MOSAIC/Work/Laure/run_mosaic/store/mosaic-workspace/7/A/1/9/7A19915235B14D88BA0E22E2F787A601/004-periodicity/MZ.o -e /data/collab/MOSAIC/Work/Laure/run_mosaic/store/mosaic-workspace/7/A/1/9/7A19915235B14D88BA0E22E2F787A601/004-periodicity/MZ.e -n 28 -p skl.q -t 3600 --exclusive /data/collab/MOSAIC/Work/Laure/run_mosaic/store/mosaic-workspace/7/A/1/9/7A19915235B14D88BA0E22E2F787A601/004-periodicity/MOSAIC.job;sleep 5 )
Ce qui donne un job Rosetta de 3600 minutes = 2jours et 12h